Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SSSCA1O60232 MBLAC2-202ENST00000514906 1936 ntBASIC12.54□□□□□ -0.4
SSSCA1O60232 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.54□□□□□ -0.4
SSSCA1O60232 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SSSCA1O60232 AL359881.3-201ENST00000602640 1721 ntBASIC12.54□□□□□ -0.4
SSSCA1O60232 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SSSCA1O60232 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SSSCA1O60232 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SSSCA1O60232 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SSSCA1O60232 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 AC018442.1-201ENST00000421439 2061 ntBASIC12.54□□□□□ -0.4
SSSCA1O60232 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
SSSCA1O60232 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SSSCA1O60232 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.54□□□□□ -0.4
SSSCA1O60232 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.54□□□□□ -0.4
SSSCA1O60232 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.54□□□□□ -0.4
SSSCA1O60232 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
SSSCA1O60232 AC136604.1-201ENST00000418535 575 ntBASIC12.54□□□□□ -0.4
SSSCA1O60232 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.54□□□□□ -0.4
SSSCA1O60232 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.54□□□□□ -0.4
SSSCA1O60232 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.54□□□□□ -0.4
SSSCA1O60232 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.54□□□□□ -0.4
SSSCA1O60232 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.54□□□□□ -0.4
SSSCA1O60232 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.54□□□□□ -0.4
SSSCA1O60232 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.54□□□□□ -0.4
SSSCA1O60232 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.54□□□□□ -0.4
SSSCA1O60232 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.54□□□□□ -0.4
SSSCA1O60232 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.54□□□□□ -0.4
SSSCA1O60232 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SSSCA1O60232 AL031008.1-201ENST00000619963 541 ntBASIC12.54□□□□□ -0.4
SSSCA1O60232 AC148477.8-201ENST00000624298 468 ntBASIC12.54□□□□□ -0.4
SSSCA1O60232 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.54□□□□□ -0.4
SSSCA1O60232 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.54□□□□□ -0.4
SSSCA1O60232 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
SSSCA1O60232 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SSSCA1O60232 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSSCA1O60232 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSSCA1O60232 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSSCA1O60232 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SSSCA1O60232 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.54□□□□□ -0.4
SSSCA1O60232 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSSCA1O60232 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SSSCA1O60232 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.53□□□□□ -0.4
SSSCA1O60232 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
SSSCA1O60232 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.53□□□□□ -0.4
SSSCA1O60232 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.53□□□□□ -0.4
SSSCA1O60232 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SSSCA1O60232 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.53□□□□□ -0.4
SSSCA1O60232 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.53□□□□□ -0.4
SSSCA1O60232 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.53□□□□□ -0.4
SSSCA1O60232 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SSSCA1O60232 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SSSCA1O60232 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.53□□□□□ -0.4
SSSCA1O60232 AC026979.3-201ENST00000607315 403 ntBASIC12.53□□□□□ -0.4
SSSCA1O60232 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.53□□□□□ -0.4
SSSCA1O60232 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms