Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP2AO43633 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CHMP2AO43633 LRRC59-203ENST00000576448 1531 ntBASIC17.2■□□□□ 0.34
CHMP2AO43633 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP2AO43633 AC126755.1-201ENST00000525846 6405 ntBASIC17.2■□□□□ 0.34
CHMP2AO43633 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHMP2AO43633 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP2AO43633 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP2AO43633 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP2AO43633 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHMP2AO43633 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.19■□□□□ 0.34
CHMP2AO43633 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CHMP2AO43633 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP2AO43633 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP2AO43633 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP2AO43633 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHMP2AO43633 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP2AO43633 AL139094.1-201ENST00000405549 1188 ntBASIC17.19■□□□□ 0.34
CHMP2AO43633 NUS1P3-201ENST00000423502 862 ntBASIC17.19■□□□□ 0.34
CHMP2AO43633 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHMP2AO43633 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHMP2AO43633 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.19■□□□□ 0.34
CHMP2AO43633 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 GNRHR2-203ENST00000581100 1187 ntBASIC17.19■□□□□ 0.34
CHMP2AO43633 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.19■□□□□ 0.34
CHMP2AO43633 MIR6775-201ENST00000617557 69 ntBASIC17.19■□□□□ 0.34
CHMP2AO43633 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP2AO43633 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHMP2AO43633 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP2AO43633 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP2AO43633 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CHMP2AO43633 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP2AO43633 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CHMP2AO43633 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP2AO43633 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP2AO43633 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 AC126365.1-201ENST00000578585 1514 ntBASIC17.18■□□□□ 0.34
CHMP2AO43633 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP2AO43633 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
CHMP2AO43633 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.18■□□□□ 0.34
CHMP2AO43633 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CHMP2AO43633 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CHMP2AO43633 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP2AO43633 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CHMP2AO43633 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.18■□□□□ 0.34
CHMP2AO43633 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CHMP2AO43633 AC114812.1-204ENST00000449669 728 ntBASIC17.18■□□□□ 0.34
CHMP2AO43633 AC022210.1-201ENST00000449856 793 ntBASIC17.18■□□□□ 0.34
CHMP2AO43633 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.18■□□□□ 0.34
CHMP2AO43633 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.18■□□□□ 0.34
CHMP2AO43633 CTBP2P5-201ENST00000454986 1264 ntBASIC17.18■□□□□ 0.34
CHMP2AO43633 AC007551.1-201ENST00000457394 519 ntBASIC17.18■□□□□ 0.34
CHMP2AO43633 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.18■□□□□ 0.34
CHMP2AO43633 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CHMP2AO43633 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP2AO43633 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP2AO43633 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP2AO43633 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP2AO43633 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP2AO43633 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms