Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.7■□□□□ 0.1
COCHO43405 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.7■□□□□ 0.1
COCHO43405 AL591846.1-201ENST00000451736 433 ntBASIC15.7■□□□□ 0.1
COCHO43405 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.7■□□□□ 0.1
COCHO43405 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.7■□□□□ 0.1
COCHO43405 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.7■□□□□ 0.1
COCHO43405 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.7■□□□□ 0.1
COCHO43405 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
COCHO43405 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 REXO1L2P-201ENST00000425429 2069 ntBASIC15.7■□□□□ 0.1
COCHO43405 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.7■□□□□ 0.1
COCHO43405 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 LILRP1-201ENST00000444199 1370 ntBASIC15.7■□□□□ 0.1
COCHO43405 KRT8P4-201ENST00000509735 1454 ntBASIC15.7■□□□□ 0.1
COCHO43405 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.7■□□□□ 0.1
COCHO43405 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
COCHO43405 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COCHO43405 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.7■□□□□ 0.1
COCHO43405 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COCHO43405 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COCHO43405 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COCHO43405 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.69■□□□□ 0.1
COCHO43405 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COCHO43405 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.69■□□□□ 0.1
COCHO43405 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.69■□□□□ 0.1
COCHO43405 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.69■□□□□ 0.1
COCHO43405 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.69■□□□□ 0.1
COCHO43405 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.69■□□□□ 0.1
COCHO43405 AC005695.3-201ENST00000614522 232 ntBASIC15.69■□□□□ 0.1
COCHO43405 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.69■□□□□ 0.1
COCHO43405 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.69■□□□□ 0.1
COCHO43405 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 AC105917.1-201ENST00000506637 2539 ntBASIC15.69■□□□□ 0.1
COCHO43405 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.69■□□□□ 0.1
COCHO43405 PPT1-215ENST00000641471 2368 ntBASIC15.69■□□□□ 0.1
COCHO43405 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.69■□□□□ 0.1
COCHO43405 AL162727.3-201ENST00000635661 2787 ntBASIC15.69■□□□□ 0.1
COCHO43405 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.69■□□□□ 0.1
COCHO43405 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COCHO43405 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
COCHO43405 FKBP4P6-201ENST00000457486 1332 ntBASIC15.68■□□□□ 0.1
COCHO43405 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
COCHO43405 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COCHO43405 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.68■□□□□ 0.1
COCHO43405 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COCHO43405 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COCHO43405 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.68■□□□□ 0.1
COCHO43405 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.68■□□□□ 0.1
COCHO43405 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COCHO43405 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.68■□□□□ 0.1
COCHO43405 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COCHO43405 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
COCHO43405 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.68■□□□□ 0.1
COCHO43405 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.68■□□□□ 0.1
COCHO43405 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms