Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM1O00151 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.68□□□□□ -0.06
PDLIM1O00151 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM1O00151 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.68□□□□□ -0.06
PDLIM1O00151 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.68□□□□□ -0.06
PDLIM1O00151 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM1O00151 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM1O00151 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM1O00151 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.68□□□□□ -0.06
PDLIM1O00151 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM1O00151 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PDLIM1O00151 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.67□□□□□ -0.06
PDLIM1O00151 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PDLIM1O00151 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PDLIM1O00151 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.67□□□□□ -0.06
PDLIM1O00151 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PDLIM1O00151 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PDLIM1O00151 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
PDLIM1O00151 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
PDLIM1O00151 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PDLIM1O00151 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.67□□□□□ -0.06
PDLIM1O00151 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.67□□□□□ -0.06
PDLIM1O00151 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.67□□□□□ -0.06
PDLIM1O00151 AL355306.1-201ENST00000415580 579 ntBASIC14.67□□□□□ -0.06
PDLIM1O00151 AC211486.1-202ENST00000416371 468 ntBASIC14.67□□□□□ -0.06
PDLIM1O00151 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.67□□□□□ -0.06
PDLIM1O00151 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 KRT18P34-201ENST00000488218 1270 ntBASIC14.67□□□□□ -0.06
PDLIM1O00151 AC211476.1-201ENST00000503899 468 ntBASIC14.67□□□□□ -0.06
PDLIM1O00151 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.67□□□□□ -0.06
PDLIM1O00151 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.67□□□□□ -0.06
PDLIM1O00151 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.67□□□□□ -0.06
PDLIM1O00151 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.67□□□□□ -0.06
PDLIM1O00151 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.67□□□□□ -0.06
PDLIM1O00151 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.67□□□□□ -0.06
PDLIM1O00151 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PDLIM1O00151 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.67□□□□□ -0.06
PDLIM1O00151 GPALPP1-207ENST00000611650 899 ntBASIC14.67□□□□□ -0.06
PDLIM1O00151 AL161645.1-201ENST00000622716 1255 ntBASIC14.67□□□□□ -0.06
PDLIM1O00151 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.67□□□□□ -0.06
PDLIM1O00151 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.67□□□□□ -0.06
PDLIM1O00151 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.67□□□□□ -0.06
PDLIM1O00151 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PDLIM1O00151 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.67□□□□□ -0.06
PDLIM1O00151 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.67□□□□□ -0.06
PDLIM1O00151 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.67□□□□□ -0.06
PDLIM1O00151 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.67□□□□□ -0.06
PDLIM1O00151 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.67□□□□□ -0.06
PDLIM1O00151 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PDLIM1O00151 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 AC105206.1-202ENST00000314927 2368 ntBASIC14.67□□□□□ -0.06
PDLIM1O00151 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM1O00151 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
PDLIM1O00151 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.67□□□□□ -0.06
PDLIM1O00151 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDLIM1O00151 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.66□□□□□ -0.06
PDLIM1O00151 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDLIM1O00151 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.66□□□□□ -0.06
PDLIM1O00151 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDLIM1O00151 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.66□□□□□ -0.06
PDLIM1O00151 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDLIM1O00151 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.66□□□□□ -0.06
PDLIM1O00151 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.66□□□□□ -0.06
PDLIM1O00151 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDLIM1O00151 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDLIM1O00151 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDLIM1O00151 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDLIM1O00151 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDLIM1O00151 POM121L4P-202ENST00000427789 1891 ntBASIC14.66□□□□□ -0.06
PDLIM1O00151 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDLIM1O00151 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDLIM1O00151 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.66□□□□□ -0.06
PDLIM1O00151 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDLIM1O00151 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PDLIM1O00151 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDLIM1O00151 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.66□□□□□ -0.06
PDLIM1O00151 FAM8A3P-201ENST00000427218 844 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms