Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 AC005324.6-201ENST00000587972 613 ntBASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 PPT1-215ENST00000641471 2368 ntBASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 TUBB8P8-201ENST00000458717 1058 ntBASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 TSACC-208ENST00000481479 741 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 AC005740.2-201ENST00000511085 419 ntBASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 DUX4L46-201ENST00000566845 751 ntBASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 PCBP2-OT1-201ENST00000634357 590 ntBASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 AC006058.4-201ENST00000624016 1670 ntBASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 PCDHGB8P-201ENST00000502926 1973 ntBASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 AC004899.1-201ENST00000424687 1714 ntBASIC21.65■■□□□ 1.06
CCDC144AA2RUR9 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 AK6-201ENST00000380818 1183 ntTSL 2 BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 GCOM2-201ENST00000509133 1104 ntBASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 AC131206.1-201ENST00000538078 1211 ntBASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 AC138627.1-207ENST00000641560 1006 ntBASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC144AA2RUR9 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC144AA2RUR9 NPPA-201ENST00000376476 728 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms