Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 FAM58BP-201ENST00000439056 645 ntBASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 IGLV3-15-201ENST00000518356 244 ntBASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 PRORSD1P-202ENST00000563365 2154 ntBASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 AC020910.5-201ENST00000623668 1865 ntBASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 NAP1L6-202ENST00000641404 1222 ntBASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC2Q9Y5Z7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 AL137783.1-201ENST00000623494 1896 ntBASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 AC011840.2-201ENST00000563063 1520 ntBASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 VDAC1P1-201ENST00000439229 848 ntBASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 FGFR3P1-201ENST00000449999 601 ntBASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 AC104784.1-201ENST00000473096 294 ntBASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 AC073352.2-201ENST00000609385 439 ntBASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 CYP2T1P-202ENST00000641596 2535 ntBASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HCFC2Q9Y5Z7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms