Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPBQ9Y5S2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 C18orf15-201ENST00000623680 2534 ntBASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 AC020658.6-201ENST00000623564 1870 ntBASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 AC114947.1-202ENST00000514136 344 ntBASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 AC003686.1-201ENST00000550956 1034 ntBASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 MIR5196-201ENST00000578146 115 ntBASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 AL132780.4-201ENST00000624870 1135 ntBASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 AC126365.1-201ENST00000578585 1514 ntBASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPBQ9Y5S2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 HIST2H2BA-201ENST00000412169 381 ntBASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 AC005357.2-202ENST00000590507 1060 ntBASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 AC009084.3-201ENST00000623356 437 ntBASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 HNRNPA1P27-201ENST00000412087 955 ntBASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 LYPLA2P1-203ENST00000447689 696 ntBASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 AL035414.1-201ENST00000451327 857 ntBASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 AC093752.3-201ENST00000567343 901 ntBASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC22.4■■□□□ 1.18
CDC42BPBQ9Y5S2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDC42BPBQ9Y5S2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDC42BPBQ9Y5S2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDC42BPBQ9Y5S2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC22.39■■□□□ 1.18
CDC42BPBQ9Y5S2 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDC42BPBQ9Y5S2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDC42BPBQ9Y5S2 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDC42BPBQ9Y5S2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDC42BPBQ9Y5S2 R3HDM2P2-201ENST00000401880 2116 ntBASIC22.39■■□□□ 1.18
CDC42BPBQ9Y5S2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPBQ9Y5S2 AC026691.1-201ENST00000602502 2017 ntBASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms