Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 ELK2AP-201ENST00000392510 1007 ntBASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 AC026954.1-201ENST00000429771 1293 ntBASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 C2orf27AP3-201ENST00000434123 579 ntBASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 AL354718.3-201ENST00000616414 581 ntBASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 CR382287.1-201ENST00000623954 586 ntBASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 POR-201ENST00000394893 2532 ntTSL 5 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDZRN3Q9UPQ7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 FER1L4-210ENST00000615531 5998 ntBASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 CNN2P8-201ENST00000421872 913 ntBASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 AC022137.2-201ENST00000503482 481 ntBASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 C2orf69P2-201ENST00000562032 1123 ntBASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 AC106872.11-201ENST00000605838 421 ntBASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC19.71■□□□□ 0.75
PDZRN3Q9UPQ7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.71■□□□□ 0.74
PDZRN3Q9UPQ7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms