Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 EIF3FP3-201ENST00000434851 1086 ntBASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 TTTY23B-201ENST00000442790 549 ntBASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 AC022616.1-201ENST00000518688 554 ntBASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 CR383656.12-201ENST00000549567 513 ntBASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 AC015936.2-201ENST00000593177 259 ntBASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 AC068587.6-202ENST00000641839 5619 ntBASIC17.44■□□□□ 0.38
PCDHA4Q9UN74 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 TMEM14DP-201ENST00000422205 345 ntBASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 GIMAP3P-201ENST00000495150 836 ntBASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 AP001889.1-201ENST00000525414 633 ntBASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 AC008735.3-201ENST00000596646 500 ntBASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA4Q9UN74 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 LRRC59-203ENST00000576448 1531 ntBASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 USP32P1-208ENST00000506594 1164 ntBASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 AL603764.1-201ENST00000636452 321 ntBASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms