Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
COL20A1Q9P218 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL20A1Q9P218 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.14■□□□□ 0.33
COL20A1Q9P218 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 AP001258.2-201ENST00000529891 490 ntBASIC17.13■□□□□ 0.33
COL20A1Q9P218 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL20A1Q9P218 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
COL20A1Q9P218 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL20A1Q9P218 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 AC091951.1-201ENST00000512854 2465 ntBASIC17.12■□□□□ 0.33
COL20A1Q9P218 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL20A1Q9P218 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL20A1Q9P218 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL20A1Q9P218 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL20A1Q9P218 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL20A1Q9P218 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL20A1Q9P218 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL20A1Q9P218 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.12■□□□□ 0.33
COL20A1Q9P218 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 AC103810.3-201ENST00000583567 96 ntBASIC17.12■□□□□ 0.33
COL20A1Q9P218 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 AL139099.5-201ENST00000635274 300 ntBASIC17.12■□□□□ 0.33
COL20A1Q9P218 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL20A1Q9P218 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL20A1Q9P218 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL20A1Q9P218 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COL20A1Q9P218 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL20A1Q9P218 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.12■□□□□ 0.33
COL20A1Q9P218 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL20A1Q9P218 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
COL20A1Q9P218 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COL20A1Q9P218 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.11■□□□□ 0.33
COL20A1Q9P218 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL20A1Q9P218 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL20A1Q9P218 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.11■□□□□ 0.33
COL20A1Q9P218 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COL20A1Q9P218 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
COL20A1Q9P218 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL20A1Q9P218 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL20A1Q9P218 AC013268.4-201ENST00000637413 2228 ntBASIC17.11■□□□□ 0.33
COL20A1Q9P218 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.11■□□□□ 0.33
COL20A1Q9P218 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL20A1Q9P218 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL20A1Q9P218 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL20A1Q9P218 POM121L10P-201ENST00000436994 1285 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms