Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 MST1L-201ENST00000442552 2185 ntBASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP13A1Q9HD20 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 AC018665.1-201ENST00000622927 1362 ntBASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 BCRP2-202ENST00000447763 634 ntBASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 BCRP6-201ENST00000510112 632 ntBASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 BCRP7-201ENST00000511549 544 ntBASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 AP001889.1-201ENST00000525414 633 ntBASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 AL022328.1-201ENST00000610050 478 ntBASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP13A1Q9HD20 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 KLF2P2-201ENST00000416807 1039 ntBASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP13A1Q9HD20 KRT43P-201ENST00000434019 910 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms