Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CDH20Q9HBT6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 TP53TG3HP-202ENST00000569755 579 ntBASIC13.44□□□□□ -0.26
CDH20Q9HBT6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.44□□□□□ -0.26
CDH20Q9HBT6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CDH20Q9HBT6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 AL442647.2-201ENST00000429864 857 ntBASIC13.43□□□□□ -0.26
CDH20Q9HBT6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 AC092552.1-201ENST00000547243 906 ntBASIC13.43□□□□□ -0.26
CDH20Q9HBT6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 AC133539.2-201ENST00000604757 467 ntBASIC13.43□□□□□ -0.26
CDH20Q9HBT6 TMEM261P1-201ENST00000604899 340 ntBASIC13.43□□□□□ -0.26
CDH20Q9HBT6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 INTS4P2-202ENST00000614726 2019 ntBASIC13.43□□□□□ -0.26
CDH20Q9HBT6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDH20Q9HBT6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms