Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 AL022328.3-201ENST00000607943 679 ntBASIC17.78■□□□□ 0.44
SH2D4AQ9H788 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.78■□□□□ 0.44
SH2D4AQ9H788 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.78■□□□□ 0.44
SH2D4AQ9H788 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 AC105250.1-201ENST00000509378 2057 ntBASIC17.77■□□□□ 0.44
SH2D4AQ9H788 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 MIR1247-201ENST00000408206 136 ntBASIC17.77■□□□□ 0.44
SH2D4AQ9H788 AC079178.1-201ENST00000420915 656 ntBASIC17.77■□□□□ 0.44
SH2D4AQ9H788 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 AC007969.1-201ENST00000433675 447 ntBASIC17.77■□□□□ 0.44
SH2D4AQ9H788 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 AL118558.3-201ENST00000607414 1079 ntBASIC17.77■□□□□ 0.44
SH2D4AQ9H788 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SH2D4AQ9H788 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.77■□□□□ 0.43
SH2D4AQ9H788 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SH2D4AQ9H788 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SH2D4AQ9H788 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SH2D4AQ9H788 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SH2D4AQ9H788 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SH2D4AQ9H788 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 AC126177.1-201ENST00000547829 2218 ntBASIC17.76■□□□□ 0.43
SH2D4AQ9H788 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 POM121L8P-201ENST00000417732 1281 ntBASIC17.76■□□□□ 0.43
SH2D4AQ9H788 GPAA1P2-201ENST00000417923 928 ntBASIC17.76■□□□□ 0.43
SH2D4AQ9H788 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.76■□□□□ 0.43
SH2D4AQ9H788 POM121L9P-203ENST00000441984 1285 ntBASIC17.76■□□□□ 0.43
SH2D4AQ9H788 AL591846.1-201ENST00000451736 433 ntBASIC17.76■□□□□ 0.43
SH2D4AQ9H788 KRT8P13-201ENST00000463294 1010 ntBASIC17.76■□□□□ 0.43
SH2D4AQ9H788 COX5BP1-201ENST00000507622 393 ntBASIC17.76■□□□□ 0.43
SH2D4AQ9H788 AP001258.2-201ENST00000529891 490 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms