Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 LILRP1-201ENST00000444199 1370 ntBASIC18.01■□□□□ 0.47
RNF41Q9H4P4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18■□□□□ 0.47
RNF41Q9H4P4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18■□□□□ 0.47
RNF41Q9H4P4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RNF41Q9H4P4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF41Q9H4P4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF41Q9H4P4 ZBED1P1-201ENST00000502364 1930 ntBASIC18■□□□□ 0.47
RNF41Q9H4P4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18■□□□□ 0.47
RNF41Q9H4P4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18■□□□□ 0.47
RNF41Q9H4P4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18■□□□□ 0.47
RNF41Q9H4P4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18■□□□□ 0.47
RNF41Q9H4P4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18■□□□□ 0.47
RNF41Q9H4P4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18■□□□□ 0.47
RNF41Q9H4P4 C2orf27AP3-201ENST00000434123 579 ntBASIC18■□□□□ 0.47
RNF41Q9H4P4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
RNF41Q9H4P4 KRT17P8-201ENST00000540749 863 ntBASIC18■□□□□ 0.47
RNF41Q9H4P4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18■□□□□ 0.47
RNF41Q9H4P4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18■□□□□ 0.47
RNF41Q9H4P4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RNF41Q9H4P4 AL354718.3-201ENST00000616414 581 ntBASIC18■□□□□ 0.47
RNF41Q9H4P4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 CR382287.1-201ENST00000623954 586 ntBASIC18■□□□□ 0.47
RNF41Q9H4P4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF41Q9H4P4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18■□□□□ 0.47
RNF41Q9H4P4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF41Q9H4P4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
RNF41Q9H4P4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF41Q9H4P4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18■□□□□ 0.47
RNF41Q9H4P4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.99■□□□□ 0.47
RNF41Q9H4P4 REXO1L2P-201ENST00000425429 2069 ntBASIC17.99■□□□□ 0.47
RNF41Q9H4P4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 EIF3FP3-201ENST00000434851 1086 ntBASIC17.99■□□□□ 0.47
RNF41Q9H4P4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 GPR53P-205ENST00000457298 1084 ntBASIC17.99■□□□□ 0.47
RNF41Q9H4P4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 AL138709.1-201ENST00000614840 1693 ntBASIC17.99■□□□□ 0.47
RNF41Q9H4P4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF41Q9H4P4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms