Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 AC026150.2-201ENST00000564693 1156 ntBASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 AC018529.1-201ENST00000613063 361 ntBASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
AMBRA1Q9C0C7 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 GHSR-202ENST00000427970 912 ntBASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 AC069262.1-201ENST00000539058 672 ntBASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 AL133215.2-201ENST00000609242 977 ntBASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 AC093028.1-201ENST00000622998 982 ntBASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 OR2I1P-210ENST00000642037 4691 ntBASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 MBLAC2-202ENST00000514906 1936 ntBASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
AMBRA1Q9C0C7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 AC092135.3-201ENST00000624151 1846 ntBASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 SPDYE7P-202ENST00000420373 878 ntBASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 AC004449.1-201ENST00000564240 433 ntBASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.36□□□□□ -0.11
AMBRA1Q9C0C7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms