Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 AC005840.4-201ENST00000541242 2494 ntBASIC15.84■□□□□ 0.13
C9orf72Q96LT7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 AC097493.3-201ENST00000509725 367 ntBASIC15.84■□□□□ 0.13
C9orf72Q96LT7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 MIR4745-201ENST00000577608 62 ntBASIC15.84■□□□□ 0.13
C9orf72Q96LT7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 AC097359.2-201ENST00000604992 2389 ntBASIC15.84■□□□□ 0.13
C9orf72Q96LT7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.84■□□□□ 0.13
C9orf72Q96LT7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
C9orf72Q96LT7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
C9orf72Q96LT7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.83■□□□□ 0.13
C9orf72Q96LT7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
C9orf72Q96LT7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.83■□□□□ 0.13
C9orf72Q96LT7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
C9orf72Q96LT7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
C9orf72Q96LT7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 AC104581.4-201ENST00000623126 3052 ntBASIC15.83■□□□□ 0.12
C9orf72Q96LT7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 AC003101.2-201ENST00000612557 442 ntBASIC15.83■□□□□ 0.12
C9orf72Q96LT7 AL390754.1-201ENST00000619088 582 ntBASIC15.83■□□□□ 0.12
C9orf72Q96LT7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
C9orf72Q96LT7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.82■□□□□ 0.12
C9orf72Q96LT7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms