Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 CD8B2-202ENST00000417670 633 ntBASIC16.46■□□□□ 0.23
SNX27Q96L92 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.46■□□□□ 0.23
SNX27Q96L92 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.46■□□□□ 0.23
SNX27Q96L92 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 TMEM198B-204ENST00000484016 896 ntBASIC16.46■□□□□ 0.23
SNX27Q96L92 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.46■□□□□ 0.23
SNX27Q96L92 RNA5SP412-201ENST00000516234 123 ntBASIC16.46■□□□□ 0.23
SNX27Q96L92 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.46■□□□□ 0.23
SNX27Q96L92 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.46■□□□□ 0.23
SNX27Q96L92 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SNX27Q96L92 AC006453.4-201ENST00000636949 1252 ntBASIC16.46■□□□□ 0.23
SNX27Q96L92 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX27Q96L92 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX27Q96L92 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 AC132872.4-202ENST00000622924 2756 ntBASIC16.46■□□□□ 0.23
SNX27Q96L92 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX27Q96L92 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX27Q96L92 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SNX27Q96L92 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SNX27Q96L92 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SNX27Q96L92 AC055811.4-201ENST00000624039 1754 ntBASIC16.46■□□□□ 0.22
SNX27Q96L92 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SNX27Q96L92 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
SNX27Q96L92 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SNX27Q96L92 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.46■□□□□ 0.22
SNX27Q96L92 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX27Q96L92 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SNX27Q96L92 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX27Q96L92 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SNX27Q96L92 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX27Q96L92 AC105917.1-201ENST00000506637 2539 ntBASIC16.45■□□□□ 0.22
SNX27Q96L92 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX27Q96L92 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX27Q96L92 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX27Q96L92 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX27Q96L92 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX27Q96L92 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX27Q96L92 FAM21FP-201ENST00000426241 1131 ntBASIC16.45■□□□□ 0.22
SNX27Q96L92 YBX1P6-201ENST00000442962 1002 ntBASIC16.45■□□□□ 0.22
SNX27Q96L92 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX27Q96L92 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.45■□□□□ 0.22
SNX27Q96L92 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.45■□□□□ 0.22
SNX27Q96L92 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX27Q96L92 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX27Q96L92 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX27Q96L92 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX27Q96L92 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX27Q96L92 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX27Q96L92 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX27Q96L92 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX27Q96L92 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SNX27Q96L92 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.44■□□□□ 0.22
SNX27Q96L92 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.44■□□□□ 0.22
SNX27Q96L92 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SNX27Q96L92 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.44■□□□□ 0.22
SNX27Q96L92 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SNX27Q96L92 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 TPM3P8-201ENST00000330554 643 ntBASIC16.44■□□□□ 0.22
SNX27Q96L92 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.44■□□□□ 0.22
SNX27Q96L92 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.44■□□□□ 0.22
SNX27Q96L92 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.44■□□□□ 0.22
SNX27Q96L92 POM121L8P-201ENST00000417732 1281 ntBASIC16.44■□□□□ 0.22
SNX27Q96L92 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.44■□□□□ 0.22
SNX27Q96L92 POM121L9P-203ENST00000441984 1285 ntBASIC16.44■□□□□ 0.22
SNX27Q96L92 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SNX27Q96L92 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.44■□□□□ 0.22
SNX27Q96L92 AC104306.2-201ENST00000451877 341 ntBASIC16.44■□□□□ 0.22
SNX27Q96L92 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.44■□□□□ 0.22
SNX27Q96L92 KRT8P13-201ENST00000463294 1010 ntBASIC16.44■□□□□ 0.22
SNX27Q96L92 RN7SL818P-201ENST00000485099 259 ntBASIC16.44■□□□□ 0.22
SNX27Q96L92 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.44■□□□□ 0.22
SNX27Q96L92 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.44■□□□□ 0.22
SNX27Q96L92 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.44■□□□□ 0.22
SNX27Q96L92 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.44■□□□□ 0.22
SNX27Q96L92 RN7SL725P-201ENST00000606439 259 ntBASIC16.44■□□□□ 0.22
SNX27Q96L92 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.44■□□□□ 0.22
SNX27Q96L92 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX27Q96L92 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.44■□□□□ 0.22
SNX27Q96L92 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms