Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 CICP23-201ENST00000605013 2741 ntBASIC13.45□□□□□ -0.26
TMEM54Q969K7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 AC022616.1-201ENST00000518688 554 ntBASIC13.45□□□□□ -0.26
TMEM54Q969K7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 DUX4L47-201ENST00000566374 394 ntBASIC13.45□□□□□ -0.26
TMEM54Q969K7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM54Q969K7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM54Q969K7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.44□□□□□ -0.26
TMEM54Q969K7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 AC093433.1-201ENST00000458048 571 ntBASIC13.44□□□□□ -0.26
TMEM54Q969K7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 AL603764.1-201ENST00000636452 321 ntBASIC13.44□□□□□ -0.26
TMEM54Q969K7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 AC063926.3-201ENST00000624734 5658 ntBASIC13.44□□□□□ -0.26
TMEM54Q969K7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.44□□□□□ -0.26
TMEM54Q969K7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM54Q969K7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.43□□□□□ -0.26
TMEM54Q969K7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM54Q969K7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM54Q969K7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM54Q969K7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms