Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.21■□□□□ 0.35
USP6NLQ92738 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.21■□□□□ 0.35
USP6NLQ92738 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
USP6NLQ92738 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.21■□□□□ 0.35
USP6NLQ92738 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
USP6NLQ92738 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
USP6NLQ92738 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 AC069218.1-201ENST00000435269 762 ntBASIC17.21■□□□□ 0.35
USP6NLQ92738 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.21■□□□□ 0.35
USP6NLQ92738 AC234782.1-201ENST00000451950 919 ntBASIC17.21■□□□□ 0.35
USP6NLQ92738 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.21■□□□□ 0.35
USP6NLQ92738 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 AL353770.1-201ENST00000614915 403 ntBASIC17.21■□□□□ 0.35
USP6NLQ92738 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
USP6NLQ92738 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.21■□□□□ 0.35
USP6NLQ92738 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP6NLQ92738 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
USP6NLQ92738 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.2■□□□□ 0.34
USP6NLQ92738 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 LINC02447-202ENST00000501888 2146 ntBASIC17.2■□□□□ 0.34
USP6NLQ92738 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.2■□□□□ 0.34
USP6NLQ92738 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
USP6NLQ92738 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
USP6NLQ92738 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.2■□□□□ 0.34
USP6NLQ92738 PUDPP3-201ENST00000445368 636 ntBASIC17.2■□□□□ 0.34
USP6NLQ92738 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.2■□□□□ 0.34
USP6NLQ92738 AC008267.1-201ENST00000474858 1069 ntBASIC17.2■□□□□ 0.34
USP6NLQ92738 AC125604.1-201ENST00000496255 707 ntBASIC17.2■□□□□ 0.34
USP6NLQ92738 AC026434.2-201ENST00000506094 1078 ntBASIC17.2■□□□□ 0.34
USP6NLQ92738 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.2■□□□□ 0.34
USP6NLQ92738 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.2■□□□□ 0.34
USP6NLQ92738 AC103988.2-201ENST00000561804 725 ntBASIC17.2■□□□□ 0.34
USP6NLQ92738 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.2■□□□□ 0.34
USP6NLQ92738 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.2■□□□□ 0.34
USP6NLQ92738 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.2■□□□□ 0.34
USP6NLQ92738 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.2■□□□□ 0.34
USP6NLQ92738 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP6NLQ92738 FKBP4P6-201ENST00000457486 1332 ntBASIC17.2■□□□□ 0.34
USP6NLQ92738 AC127383.1-201ENST00000444697 1800 ntBASIC17.19■□□□□ 0.34
USP6NLQ92738 AL513477.1-201ENST00000602865 2407 ntBASIC17.19■□□□□ 0.34
USP6NLQ92738 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.19■□□□□ 0.34
USP6NLQ92738 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
USP6NLQ92738 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.19■□□□□ 0.34
USP6NLQ92738 RN7SKP175-201ENST00000408472 289 ntBASIC17.19■□□□□ 0.34
USP6NLQ92738 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
USP6NLQ92738 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.19■□□□□ 0.34
USP6NLQ92738 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.19■□□□□ 0.34
USP6NLQ92738 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.19■□□□□ 0.34
USP6NLQ92738 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP6NLQ92738 MIR3147-201ENST00000577811 66 ntBASIC17.19■□□□□ 0.34
USP6NLQ92738 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.19■□□□□ 0.34
USP6NLQ92738 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.19■□□□□ 0.34
USP6NLQ92738 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.19■□□□□ 0.34
USP6NLQ92738 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms