Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 BCAS2P2-201ENST00000425064 674 ntBASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC112504.1-201ENST00000623415 1841 ntBASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AL592076.1-201ENST00000424448 303 ntBASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 RN7SL277P-201ENST00000481521 288 ntBASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 IGHV1-12-201ENST00000518307 205 ntBASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC018846.1-201ENST00000568231 183 ntBASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 MIR6746-201ENST00000620971 63 ntBASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC002044.2-201ENST00000624910 970 ntBASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AL359258.3-201ENST00000622910 2331 ntBASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 SURF4-203ENST00000371991 715 ntTSL 3 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC114947.1-202ENST00000514136 344 ntBASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC004686.1-201ENST00000605113 538 ntBASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC090510.3-201ENST00000615831 821 ntBASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 AC004554.1-201ENST00000422830 1468 ntBASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC9.97□□□□□ -0.81
ALMS1Q8TCU4 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 MIR645-201ENST00000385283 94 ntBASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 MIR5001-201ENST00000580185 100 ntBASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 AP005212.2-201ENST00000584979 510 ntBASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 RNVU1-8-201ENST00000364272 125 ntBASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms