Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLHC1Q8NHS4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 TUBB3P1-201ENST00000405796 1332 ntBASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.77□□□□□ -0.04
CLHC1Q8NHS4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 HLA-V-204ENST00000476601 1289 ntBASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 HLA-J-203ENST00000494367 1087 ntBASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 AC005912.2-201ENST00000619492 2400 ntBASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLHC1Q8NHS4 AL121723.1-201ENST00000445194 1519 ntBASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 REXO1L4P-201ENST00000605109 1937 ntBASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 KRT18P13-201ENST00000400056 1290 ntBASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 CNN2P2-201ENST00000443536 909 ntBASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 CNN2P3-201ENST00000450201 906 ntBASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 AL136317.3-201ENST00000618497 906 ntBASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 AC073592.8-201ENST00000624126 511 ntBASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.76□□□□□ -0.05
CLHC1Q8NHS4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms