Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 AC078991.1-201ENST00000437297 610 ntBASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 AC103810.10-201ENST00000606504 343 ntBASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 MIR6720-201ENST00000611664 98 ntBASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHDC9Q8NEP7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 KRT8P21-201ENST00000430398 1491 ntBASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 AL118508.1-201ENST00000613502 2345 ntBASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 OR2K2-202ENST00000374428 1038 ntBASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 AL355334.1-201ENST00000417713 215 ntBASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 YRDCP1-201ENST00000621419 643 ntBASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KLHDC9Q8NEP7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 PGAM1P5-201ENST00000548011 764 ntBASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 AC135983.4-201ENST00000564116 1262 ntBASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 AC138894.2-201ENST00000602838 371 ntBASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 MEG3_2.1-201ENST00000611456 105 ntBASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 MIR6842-201ENST00000612539 65 ntBASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
KLHDC9Q8NEP7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms