Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 MIR943-201ENST00000401286 94 ntBASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 AC009477.1-201ENST00000452936 217 ntBASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF439Q8NDP4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 MROH4P-201ENST00000431302 1578 ntBASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 AC241585.1-201ENST00000433527 519 ntBASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 KRT18P43-201ENST00000469825 1281 ntBASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 DUX4L27-201ENST00000554796 1261 ntBASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF439Q8NDP4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms