Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 AC007541.1-201ENST00000570282 1469 ntBASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf42Q8N5U0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
C11orf42Q8N5U0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
C11orf42Q8N5U0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
C11orf42Q8N5U0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
C11orf42Q8N5U0 MYO15B-237ENST00000642007 4893 ntBASIC12.83□□□□□ -0.35
C11orf42Q8N5U0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 AL359258.3-201ENST00000622910 2331 ntBASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 AC139749.1-202ENST00000617529 3139 ntBASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 AC007686.3-201ENST00000619017 3487 ntBASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 RN7SL399P-201ENST00000471648 279 ntBASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 RRP7BP-205ENST00000566851 833 ntBASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 AL132655.2-201ENST00000596276 594 ntBASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 AC004233.3-201ENST00000607794 1269 ntBASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 MIR8072-201ENST00000614241 80 ntBASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf42Q8N5U0 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 AL391825.1-201ENST00000457671 1364 ntBASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 SSR4P1-203ENST00000599569 2260 ntBASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf42Q8N5U0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms