Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 SPDYE7P-202ENST00000420373 878 ntBASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 AC069335.1-201ENST00000489972 472 ntBASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 RFPL4AP1-201ENST00000530883 850 ntBASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 AKR1B10P2-201ENST00000577332 927 ntBASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 AC024267.1-201ENST00000582320 895 ntBASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 AC093028.1-201ENST00000622998 982 ntBASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
DEPDC4Q8N2C3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 AC004987.2-201ENST00000395959 1148 ntBASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 RPL5P21-201ENST00000404620 815 ntBASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 SPCS2P4-201ENST00000436160 681 ntBASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 CNN2P2-201ENST00000443536 909 ntBASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 CNN2P3-201ENST00000450201 906 ntBASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 CYMP-203ENST00000474680 1263 ntBASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 MIR3197-201ENST00000582241 73 ntBASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 AL136317.3-201ENST00000618497 906 ntBASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DEPDC4Q8N2C3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms