Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNE4Q8N205 FGFR3P5-201ENST00000564496 886 ntBASIC18.84■□□□□ 0.61
SYNE4Q8N205 MIR3907-201ENST00000579424 151 ntBASIC18.84■□□□□ 0.61
SYNE4Q8N205 AL645939.5-201ENST00000606834 243 ntBASIC18.84■□□□□ 0.61
SYNE4Q8N205 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNE4Q8N205 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNE4Q8N205 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNE4Q8N205 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 AC132872.4-202ENST00000622924 2756 ntBASIC18.84■□□□□ 0.61
SYNE4Q8N205 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNE4Q8N205 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNE4Q8N205 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNE4Q8N205 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SYNE4Q8N205 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYNE4Q8N205 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYNE4Q8N205 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYNE4Q8N205 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SYNE4Q8N205 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.83■□□□□ 0.61
SYNE4Q8N205 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.83■□□□□ 0.61
SYNE4Q8N205 REXO1L2P-201ENST00000425429 2069 ntBASIC18.83■□□□□ 0.61
SYNE4Q8N205 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SYNE4Q8N205 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYNE4Q8N205 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYNE4Q8N205 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYNE4Q8N205 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SYNE4Q8N205 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE4Q8N205 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE4Q8N205 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE4Q8N205 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNE4Q8N205 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SYNE4Q8N205 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.83■□□□□ 0.6
SYNE4Q8N205 ACTG1P2-201ENST00000415776 1125 ntBASIC18.83■□□□□ 0.6
SYNE4Q8N205 ACTG1P11-201ENST00000425411 1125 ntBASIC18.83■□□□□ 0.6
SYNE4Q8N205 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE4Q8N205 Z97180.1-201ENST00000445173 988 ntBASIC18.83■□□□□ 0.6
SYNE4Q8N205 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNE4Q8N205 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.83■□□□□ 0.6
SYNE4Q8N205 AC022217.1-201ENST00000521069 738 ntBASIC18.83■□□□□ 0.6
SYNE4Q8N205 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.83■□□□□ 0.6
SYNE4Q8N205 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.83■□□□□ 0.6
SYNE4Q8N205 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.83■□□□□ 0.6
SYNE4Q8N205 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE4Q8N205 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE4Q8N205 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.83■□□□□ 0.6
SYNE4Q8N205 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE4Q8N205 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE4Q8N205 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE4Q8N205 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE4Q8N205 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE4Q8N205 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNE4Q8N205 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SYNE4Q8N205 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
SYNE4Q8N205 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNE4Q8N205 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
SYNE4Q8N205 E2F3P2-201ENST00000447755 1422 ntBASIC18.83■□□□□ 0.6
SYNE4Q8N205 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNE4Q8N205 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE4Q8N205 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE4Q8N205 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE4Q8N205 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE4Q8N205 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE4Q8N205 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNE4Q8N205 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNE4Q8N205 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SYNE4Q8N205 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE4Q8N205 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNE4Q8N205 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE4Q8N205 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE4Q8N205 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNE4Q8N205 RN7SL11P-201ENST00000471305 293 ntBASIC18.82■□□□□ 0.6
SYNE4Q8N205 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNE4Q8N205 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.82■□□□□ 0.6
SYNE4Q8N205 BNIP3P13-201ENST00000599968 566 ntBASIC18.82■□□□□ 0.6
SYNE4Q8N205 AL136301.1-201ENST00000615830 422 ntBASIC18.82■□□□□ 0.6
SYNE4Q8N205 MIR7845-201ENST00000618396 99 ntBASIC18.82■□□□□ 0.6
SYNE4Q8N205 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.82■□□□□ 0.6
SYNE4Q8N205 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.82■□□□□ 0.6
SYNE4Q8N205 C18orf15-201ENST00000623680 2534 ntBASIC18.82■□□□□ 0.6
SYNE4Q8N205 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.82■□□□□ 0.6
SYNE4Q8N205 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SYNE4Q8N205 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNE4Q8N205 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNE4Q8N205 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE4Q8N205 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
SYNE4Q8N205 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNE4Q8N205 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE4Q8N205 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.81■□□□□ 0.6
SYNE4Q8N205 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE4Q8N205 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE4Q8N205 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.81■□□□□ 0.6
SYNE4Q8N205 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE4Q8N205 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms