Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 AC010319.3-201ENST00000597028 470 ntBASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 AC022726.2-201ENST00000634673 547 ntBASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 WASH3P-207ENST00000560956 1394 ntBASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 U91328.1-201ENST00000437528 223 ntBASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 AP001063.1-201ENST00000568332 529 ntBASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 AL360270.3-201ENST00000609118 1348 ntBASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 MSTO2P-201ENST00000314835 1709 ntBASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 LINC00528-201ENST00000600723 2160 ntBASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SCUBE3Q8IX30 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 ACKR1-201ENST00000368121 1240 ntBASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.09■□□□□ 0.17
SCUBE3Q8IX30 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms