Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 AC245100.5-201ENST00000452108 331 ntBASIC16.28■□□□□ 0.2
RNF135Q8IUD6 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 AC243562.2-201ENST00000561247 970 ntBASIC16.28■□□□□ 0.2
RNF135Q8IUD6 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 CU633904.3-201ENST00000624042 1029 ntBASIC16.28■□□□□ 0.2
RNF135Q8IUD6 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF135Q8IUD6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 MIR648-201ENST00000385046 94 ntBASIC16.27■□□□□ 0.2
RNF135Q8IUD6 MIR1202-201ENST00000408529 83 ntBASIC16.27■□□□□ 0.2
RNF135Q8IUD6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 EEF1DP4-201ENST00000446006 880 ntBASIC16.27■□□□□ 0.2
RNF135Q8IUD6 MAGEA5-201ENST00000446757 942 ntBASIC16.27■□□□□ 0.2
RNF135Q8IUD6 RN7SL720P-201ENST00000488178 304 ntBASIC16.27■□□□□ 0.2
RNF135Q8IUD6 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 AC018735.1-201ENST00000437208 1502 ntBASIC16.27■□□□□ 0.2
RNF135Q8IUD6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF135Q8IUD6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF135Q8IUD6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF135Q8IUD6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF135Q8IUD6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF135Q8IUD6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF135Q8IUD6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
RNF135Q8IUD6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF135Q8IUD6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF135Q8IUD6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.27■□□□□ 0.19
RNF135Q8IUD6 LINC02447-202ENST00000501888 2146 ntBASIC16.27■□□□□ 0.19
RNF135Q8IUD6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RNF135Q8IUD6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RNF135Q8IUD6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF135Q8IUD6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms