Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB43Q86YS6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 TDH-203ENST00000531764 1110 ntBASIC14.72□□□□□ -0.05
RAB43Q86YS6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 HNRNPUP1-201ENST00000554987 333 ntBASIC14.72□□□□□ -0.05
RAB43Q86YS6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 AL049840.4-201ENST00000602422 811 ntBASIC14.72□□□□□ -0.05
RAB43Q86YS6 AL022328.1-201ENST00000610050 478 ntBASIC14.72□□□□□ -0.05
RAB43Q86YS6 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB43Q86YS6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
RAB43Q86YS6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.72□□□□□ -0.05
RAB43Q86YS6 AC005089.1-201ENST00000619486 2241 ntBASIC14.72□□□□□ -0.05
RAB43Q86YS6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 AC006449.6-201ENST00000612330 2296 ntBASIC14.71□□□□□ -0.05
RAB43Q86YS6 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 ACTG1P3-201ENST00000431775 1114 ntBASIC14.71□□□□□ -0.05
RAB43Q86YS6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 KRT18P43-201ENST00000469825 1281 ntBASIC14.71□□□□□ -0.05
RAB43Q86YS6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 USP32P1-208ENST00000506594 1164 ntBASIC14.71□□□□□ -0.05
RAB43Q86YS6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 AC104989.1-201ENST00000519711 778 ntBASIC14.71□□□□□ -0.05
RAB43Q86YS6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 PTP4A1P2-201ENST00000546033 454 ntBASIC14.71□□□□□ -0.05
RAB43Q86YS6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 AL359711.2-201ENST00000563105 872 ntBASIC14.71□□□□□ -0.05
RAB43Q86YS6 MIR5189-201ENST00000577370 114 ntBASIC14.71□□□□□ -0.05
RAB43Q86YS6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 COX11-210ENST00000639671 696 ntBASIC14.71□□□□□ -0.05
RAB43Q86YS6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.71□□□□□ -0.05
RAB43Q86YS6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB43Q86YS6 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB43Q86YS6 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms