Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXR1Q6PIV2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXR1Q6PIV2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
FOXR1Q6PIV2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXR1Q6PIV2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
FOXR1Q6PIV2 AC005622.1-201ENST00000636801 1703 ntBASIC16.08■□□□□ 0.17
FOXR1Q6PIV2 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.08■□□□□ 0.17
FOXR1Q6PIV2 NUTM2HP-201ENST00000442076 2498 ntBASIC16.08■□□□□ 0.17
FOXR1Q6PIV2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXR1Q6PIV2 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXR1Q6PIV2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXR1Q6PIV2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 KRT8P23-201ENST00000560090 1207 ntBASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 AC008761.3-201ENST00000624803 892 ntBASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
FOXR1Q6PIV2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 GK-202ENST00000378941 458 ntTSL 3 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 AC005225.4-201ENST00000557330 545 ntBASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 WASH6P-202ENST00000359512 1437 ntBASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXR1Q6PIV2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXR1Q6PIV2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms