Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 AL009178.2-201ENST00000597278 2719 ntBASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 DRD5P1-201ENST00000456605 1438 ntBASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 GAPDHP40-201ENST00000505218 1006 ntBASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 AL359711.2-201ENST00000563105 872 ntBASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 AL645728.2-202ENST00000641679 227 ntBASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 AC106881.1-201ENST00000605849 3329 ntBASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 PCDHA3-202ENST00000532566 4594 ntBASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TTC39BQ5VTQ0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 AC007389.4-201ENST00000454674 793 ntBASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 AC239800.4-201ENST00000603712 296 ntBASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 AC025181.2-201ENST00000606994 802 ntBASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 AC107373.2-201ENST00000607735 490 ntBASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 CU634019.7-201ENST00000624153 1185 ntBASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 FP236241.2-201ENST00000624906 1185 ntBASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 CICP23-201ENST00000605013 2741 ntBASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TTC39BQ5VTQ0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms