Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 ZBTB45P1-201ENST00000452761 1456 ntBASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 AL353705.2-201ENST00000428243 662 ntBASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 FAM58CP-201ENST00000435741 640 ntBASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 HIST3H2BA-201ENST00000436555 524 ntBASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 RNA5SP416-201ENST00000516838 111 ntBASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 AC015910.1-201ENST00000579400 975 ntBASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 AC092902.6-201ENST00000641783 218 ntBASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 UXT-AS1-201ENST00000590504 1525 ntBASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 HLA-A-201ENST00000376802 1334 ntBASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC00242Q5T6M2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms