Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.74□□□□□ -0.21
RNFT1Q5M7Z0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 AC008894.3-201ENST00000624324 3103 ntBASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 AL162727.3-201ENST00000635661 2787 ntBASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 CLUHP2-201ENST00000426660 1303 ntBASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 AL360270.3-201ENST00000609118 1348 ntBASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 HSPB1P2-201ENST00000448722 546 ntBASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 AC026434.2-201ENST00000506094 1078 ntBASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 KRT8P4-201ENST00000509735 1454 ntBASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNFT1Q5M7Z0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 MIR663B-201ENST00000408361 115 ntBASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 SEC63P1-201ENST00000425785 1258 ntBASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNFT1Q5M7Z0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms