Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.22□□□□□ -0.13
PRICKLE4Q2TBC4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRICKLE4Q2TBC4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PRICKLE4Q2TBC4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRICKLE4Q2TBC4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRICKLE4Q2TBC4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.22□□□□□ -0.13
PRICKLE4Q2TBC4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 ACTBP8-201ENST00000403258 1108 ntBASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 ACTG1P3-201ENST00000431775 1114 ntBASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 RN7SL752P-201ENST00000463779 287 ntBASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 AL596325.1-201ENST00000563991 1082 ntBASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 DUX4L47-201ENST00000566374 394 ntBASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 AC009486.1-201ENST00000569860 813 ntBASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 AC010319.3-201ENST00000597028 470 ntBASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PRICKLE4Q2TBC4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PRICKLE4Q2TBC4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PRICKLE4Q2TBC4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PRICKLE4Q2TBC4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PRICKLE4Q2TBC4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PRICKLE4Q2TBC4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
PRICKLE4Q2TBC4 LINC01101-201ENST00000622953 1884 ntBASIC14.21□□□□□ -0.14
PRICKLE4Q2TBC4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.21□□□□□ -0.14
PRICKLE4Q2TBC4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 NORAD-201ENST00000565493 5339 ntBASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 FGD5P1-202ENST00000614866 2498 ntBASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 RN7SL837P-201ENST00000463010 287 ntBASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 AC011495.1-201ENST00000498085 584 ntBASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 AL358472.5-202ENST00000641448 1267 ntBASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 CICP24-201ENST00000605464 2705 ntBASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRICKLE4Q2TBC4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms