Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 AL161670.2-201ENST00000557650 1227 ntBASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 AL805961.1-203ENST00000641078 1258 ntBASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 AC011840.2-201ENST00000563063 1520 ntBASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 E2F3P2-201ENST00000447755 1422 ntBASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 AL137783.1-201ENST00000623494 1896 ntBASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 CICP11-201ENST00000434745 2827 ntBASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 RN7SKP230-201ENST00000365642 335 ntBASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 MPRIPP1-201ENST00000452433 1089 ntBASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 AC012618.1-201ENST00000461223 412 ntBASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 SPCS2P2-201ENST00000603270 608 ntBASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 SHC1P1-201ENST00000425230 1745 ntBASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRIM71Q2Q1W2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.52■□□□□ 0.23
TRIM71Q2Q1W2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM71Q2Q1W2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM71Q2Q1W2 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
TRIM71Q2Q1W2 REXO1L4P-201ENST00000605109 1937 ntBASIC16.52■□□□□ 0.23
TRIM71Q2Q1W2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM71Q2Q1W2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM71Q2Q1W2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.52■□□□□ 0.23
TRIM71Q2Q1W2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM71Q2Q1W2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM71Q2Q1W2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.23
TRIM71Q2Q1W2 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM71Q2Q1W2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM71Q2Q1W2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.52■□□□□ 0.23
TRIM71Q2Q1W2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 LINC02199-201ENST00000506655 2702 ntBASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 PUDPP3-201ENST00000445368 636 ntBASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 RPS2P36-201ENST00000456516 831 ntBASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 RPL18P13-201ENST00000478088 569 ntBASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 AL160314.3-201ENST00000556041 767 ntBASIC16.51■□□□□ 0.23
TRIM71Q2Q1W2 AC100827.2-201ENST00000563214 1194 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms