Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 AC097359.2-201ENST00000604992 2389 ntBASIC13.75□□□□□ -0.21
SCN1BQ07699 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.75□□□□□ -0.21
SCN1BQ07699 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.75□□□□□ -0.21
SCN1BQ07699 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.75□□□□□ -0.21
SCN1BQ07699 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SCN1BQ07699 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 AC113367.3-201ENST00000508316 1912 ntBASIC13.74□□□□□ -0.21
SCN1BQ07699 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 WASH3P-207ENST00000560956 1394 ntBASIC13.74□□□□□ -0.21
SCN1BQ07699 FO538757.1-201ENST00000623083 1397 ntBASIC13.74□□□□□ -0.21
SCN1BQ07699 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
SCN1BQ07699 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.74□□□□□ -0.21
SCN1BQ07699 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.74□□□□□ -0.21
SCN1BQ07699 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SCN1BQ07699 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.74□□□□□ -0.21
SCN1BQ07699 MIR940-201ENST00000401276 94 ntBASIC13.74□□□□□ -0.21
SCN1BQ07699 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.74□□□□□ -0.21
SCN1BQ07699 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.74□□□□□ -0.21
SCN1BQ07699 AC093724.1-201ENST00000448659 1027 ntBASIC13.74□□□□□ -0.21
SCN1BQ07699 AC074386.1-202ENST00000463561 864 ntBASIC13.74□□□□□ -0.21
SCN1BQ07699 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.74□□□□□ -0.21
SCN1BQ07699 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.74□□□□□ -0.21
SCN1BQ07699 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.74□□□□□ -0.21
SCN1BQ07699 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SCN1BQ07699 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.74□□□□□ -0.21
SCN1BQ07699 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.74□□□□□ -0.21
SCN1BQ07699 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.74□□□□□ -0.21
SCN1BQ07699 AL513190.1-201ENST00000621254 727 ntBASIC13.74□□□□□ -0.21
SCN1BQ07699 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.74□□□□□ -0.21
SCN1BQ07699 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.74□□□□□ -0.21
SCN1BQ07699 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.74□□□□□ -0.21
SCN1BQ07699 AC011474.4-201ENST00000623523 2076 ntBASIC13.74□□□□□ -0.21
SCN1BQ07699 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 AC152010.1-201ENST00000415779 2006 ntBASIC13.74□□□□□ -0.21
SCN1BQ07699 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.74□□□□□ -0.21
SCN1BQ07699 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SCN1BQ07699 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SCN1BQ07699 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SCN1BQ07699 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.74□□□□□ -0.21
SCN1BQ07699 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.74□□□□□ -0.21
SCN1BQ07699 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SCN1BQ07699 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.74□□□□□ -0.21
SCN1BQ07699 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.73□□□□□ -0.21
SCN1BQ07699 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SCN1BQ07699 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SCN1BQ07699 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SCN1BQ07699 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.73□□□□□ -0.21
SCN1BQ07699 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
SCN1BQ07699 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SCN1BQ07699 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.73□□□□□ -0.21
SCN1BQ07699 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SCN1BQ07699 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SCN1BQ07699 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
SCN1BQ07699 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.73□□□□□ -0.21
SCN1BQ07699 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SCN1BQ07699 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SCN1BQ07699 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SCN1BQ07699 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SCN1BQ07699 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SCN1BQ07699 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SCN1BQ07699 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.73□□□□□ -0.21
SCN1BQ07699 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SCN1BQ07699 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SCN1BQ07699 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.73□□□□□ -0.21
SCN1BQ07699 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SCN1BQ07699 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.73□□□□□ -0.21
SCN1BQ07699 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.73□□□□□ -0.21
SCN1BQ07699 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.73□□□□□ -0.21
SCN1BQ07699 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.73□□□□□ -0.21
SCN1BQ07699 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SCN1BQ07699 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.73□□□□□ -0.21
SCN1BQ07699 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.73□□□□□ -0.21
SCN1BQ07699 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.73□□□□□ -0.21
SCN1BQ07699 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.73□□□□□ -0.21
SCN1BQ07699 AC068137.2-201ENST00000605408 478 ntBASIC13.73□□□□□ -0.21
SCN1BQ07699 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms