Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CCNA1P78396 AC006449.5-201ENST00000610658 2098 ntBASIC17.25■□□□□ 0.35
CCNA1P78396 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCNA1P78396 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.25■□□□□ 0.35
CCNA1P78396 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.25■□□□□ 0.35
CCNA1P78396 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.25■□□□□ 0.35
CCNA1P78396 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CCNA1P78396 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.25■□□□□ 0.35
CCNA1P78396 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCNA1P78396 AL596276.2-201ENST00000447525 331 ntBASIC17.25■□□□□ 0.35
CCNA1P78396 EEF1DP6-201ENST00000449232 372 ntBASIC17.25■□□□□ 0.35
CCNA1P78396 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCNA1P78396 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.25■□□□□ 0.35
CCNA1P78396 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.25■□□□□ 0.35
CCNA1P78396 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.25■□□□□ 0.35
CCNA1P78396 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.25■□□□□ 0.35
CCNA1P78396 DUX4L46-201ENST00000566845 751 ntBASIC17.25■□□□□ 0.35
CCNA1P78396 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCNA1P78396 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.25■□□□□ 0.35
CCNA1P78396 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.25■□□□□ 0.35
CCNA1P78396 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNA1P78396 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNA1P78396 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.24■□□□□ 0.35
CCNA1P78396 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNA1P78396 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCNA1P78396 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNA1P78396 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.24■□□□□ 0.35
CCNA1P78396 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.24■□□□□ 0.35
CCNA1P78396 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.24■□□□□ 0.35
CCNA1P78396 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNA1P78396 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNA1P78396 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNA1P78396 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNA1P78396 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCNA1P78396 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNA1P78396 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCNA1P78396 AC091046.1-201ENST00000331871 207 ntBASIC17.24■□□□□ 0.35
CCNA1P78396 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.24■□□□□ 0.35
CCNA1P78396 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCNA1P78396 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.24■□□□□ 0.35
CCNA1P78396 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.24■□□□□ 0.35
CCNA1P78396 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNA1P78396 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCNA1P78396 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNA1P78396 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNA1P78396 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.24■□□□□ 0.35
CCNA1P78396 SPCS2P2-201ENST00000603270 608 ntBASIC17.24■□□□□ 0.35
CCNA1P78396 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.24■□□□□ 0.35
CCNA1P78396 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCNA1P78396 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CCNA1P78396 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNA1P78396 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNA1P78396 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNA1P78396 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNA1P78396 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CCNA1P78396 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CCNA1P78396 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCNA1P78396 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNA1P78396 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.24■□□□□ 0.35
CCNA1P78396 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCNA1P78396 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 CYP2T1P-202ENST00000641596 2535 ntBASIC17.23■□□□□ 0.35
CCNA1P78396 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCNA1P78396 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.23■□□□□ 0.35
CCNA1P78396 MIR33B-201ENST00000385104 96 ntBASIC17.23■□□□□ 0.35
CCNA1P78396 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCNA1P78396 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CCNA1P78396 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCNA1P78396 AC010141.1-201ENST00000411585 623 ntBASIC17.23■□□□□ 0.35
CCNA1P78396 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.23■□□□□ 0.35
CCNA1P78396 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.23■□□□□ 0.35
CCNA1P78396 AL353637.1-201ENST00000451571 732 ntBASIC17.23■□□□□ 0.35
CCNA1P78396 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms