Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 GNAQP1-201ENST00000444815 1067 ntBASIC13.4□□□□□ -0.26
HIST1H3AP68431 INGX-202ENST00000489074 768 ntBASIC13.4□□□□□ -0.26
HIST1H3AP68431 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 AC093813.1-201ENST00000605066 256 ntBASIC13.4□□□□□ -0.26
HIST1H3AP68431 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 LILRP1-201ENST00000444199 1370 ntBASIC13.4□□□□□ -0.26
HIST1H3AP68431 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
HIST1H3AP68431 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
HIST1H3AP68431 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H3AP68431 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H3AP68431 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H3AP68431 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H3AP68431 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H3AP68431 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H3AP68431 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H3AP68431 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H3AP68431 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H3AP68431 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H3AP68431 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.39□□□□□ -0.27
HIST1H3AP68431 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 VDAC1P7-201ENST00000462417 847 ntBASIC13.39□□□□□ -0.27
HIST1H3AP68431 RPL13AP25-201ENST00000484130 612 ntBASIC13.39□□□□□ -0.27
HIST1H3AP68431 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 AC055876.2-201ENST00000531834 546 ntBASIC13.39□□□□□ -0.27
HIST1H3AP68431 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 AC009118.2-201ENST00000613275 655 ntBASIC13.39□□□□□ -0.27
HIST1H3AP68431 PRSS30P-206ENST00000641773 873 ntBASIC13.39□□□□□ -0.27
HIST1H3AP68431 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H3AP68431 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H3AP68431 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H3AP68431 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H3AP68431 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H3AP68431 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 MIR770-201ENST00000390219 98 ntBASIC13.38□□□□□ -0.27
HIST1H3AP68431 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H3AP68431 HLA-K-203ENST00000430151 1046 ntBASIC13.38□□□□□ -0.27
HIST1H3AP68431 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H3AP68431 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms