Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AL603764.1-201ENST00000636452 321 ntBASIC14.57□□□□□ -0.08
SKP1P63208 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 AC093525.8-201ENST00000624099 1342 ntBASIC14.57□□□□□ -0.08
SKP1P63208 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SKP1P63208 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.57□□□□□ -0.08
SKP1P63208 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 WASH3P-207ENST00000560956 1394 ntBASIC14.57□□□□□ -0.08
SKP1P63208 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SKP1P63208 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 AC136621.1-201ENST00000624017 2304 ntBASIC14.57□□□□□ -0.08
SKP1P63208 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SKP1P63208 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
SKP1P63208 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
SKP1P63208 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.56□□□□□ -0.08
SKP1P63208 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.56□□□□□ -0.08
SKP1P63208 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SKP1P63208 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.56□□□□□ -0.08
SKP1P63208 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SKP1P63208 COX5BP8-201ENST00000416911 349 ntBASIC14.56□□□□□ -0.08
SKP1P63208 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SKP1P63208 ACTG1P3-201ENST00000431775 1114 ntBASIC14.56□□□□□ -0.08
SKP1P63208 TTTY23B-201ENST00000442790 549 ntBASIC14.56□□□□□ -0.08
SKP1P63208 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.56□□□□□ -0.08
SKP1P63208 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.56□□□□□ -0.08
SKP1P63208 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SKP1P63208 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SKP1P63208 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.56□□□□□ -0.08
SKP1P63208 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.56□□□□□ -0.08
SKP1P63208 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SKP1P63208 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.56□□□□□ -0.08
SKP1P63208 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.56□□□□□ -0.08
SKP1P63208 AC010319.3-201ENST00000597028 470 ntBASIC14.56□□□□□ -0.08
SKP1P63208 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 AC063926.2-201ENST00000623766 1308 ntBASIC14.56□□□□□ -0.08
SKP1P63208 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.56□□□□□ -0.08
SKP1P63208 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SKP1P63208 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 KRT8P44-201ENST00000441609 1350 ntBASIC14.56□□□□□ -0.08
SKP1P63208 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 C18orf15-201ENST00000623680 2534 ntBASIC14.56□□□□□ -0.08
SKP1P63208 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SKP1P63208 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.56□□□□□ -0.08
SKP1P63208 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 SBF1P1-201ENST00000444527 5631 ntBASIC14.56□□□□□ -0.08
SKP1P63208 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
SKP1P63208 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SKP1P63208 AC007787.1-201ENST00000588095 1583 ntBASIC14.56□□□□□ -0.08
SKP1P63208 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SKP1P63208 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.55□□□□□ -0.08
SKP1P63208 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SKP1P63208 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms