Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.52□□□□□ -0.25
SEC61A1P61619 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.52□□□□□ -0.25
SEC61A1P61619 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.52□□□□□ -0.25
SEC61A1P61619 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.52□□□□□ -0.25
SEC61A1P61619 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEC61A1P61619 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SEC61A1P61619 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEC61A1P61619 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SEC61A1P61619 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.51□□□□□ -0.25
SEC61A1P61619 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.51□□□□□ -0.25
SEC61A1P61619 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.51□□□□□ -0.25
SEC61A1P61619 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SEC61A1P61619 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SEC61A1P61619 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.51□□□□□ -0.25
SEC61A1P61619 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.51□□□□□ -0.25
SEC61A1P61619 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 AC100757.3-201ENST00000622361 1406 ntBASIC13.51□□□□□ -0.25
SEC61A1P61619 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SEC61A1P61619 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.51□□□□□ -0.25
SEC61A1P61619 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SEC61A1P61619 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.51□□□□□ -0.25
SEC61A1P61619 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.51□□□□□ -0.25
SEC61A1P61619 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SEC61A1P61619 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.51□□□□□ -0.25
SEC61A1P61619 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.51□□□□□ -0.25
SEC61A1P61619 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 RNA5SP421-201ENST00000516864 134 ntBASIC13.51□□□□□ -0.25
SEC61A1P61619 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.51□□□□□ -0.25
SEC61A1P61619 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.51□□□□□ -0.25
SEC61A1P61619 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.51□□□□□ -0.25
SEC61A1P61619 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.51□□□□□ -0.25
SEC61A1P61619 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.51□□□□□ -0.25
SEC61A1P61619 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.51□□□□□ -0.25
SEC61A1P61619 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.51□□□□□ -0.25
SEC61A1P61619 MIR4745-201ENST00000577608 62 ntBASIC13.51□□□□□ -0.25
SEC61A1P61619 AC061975.2-201ENST00000581722 295 ntBASIC13.51□□□□□ -0.25
SEC61A1P61619 AL365330.1-201ENST00000607459 531 ntBASIC13.51□□□□□ -0.25
SEC61A1P61619 RN7SL828P-201ENST00000607615 303 ntBASIC13.51□□□□□ -0.25
SEC61A1P61619 AJ011932.1-201ENST00000621707 465 ntBASIC13.51□□□□□ -0.25
SEC61A1P61619 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.51□□□□□ -0.25
SEC61A1P61619 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SEC61A1P61619 C18orf15-201ENST00000623680 2534 ntBASIC13.51□□□□□ -0.25
SEC61A1P61619 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SEC61A1P61619 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 AC067750.1-201ENST00000608826 6545 ntBASIC13.51□□□□□ -0.25
SEC61A1P61619 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.51□□□□□ -0.25
SEC61A1P61619 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
SEC61A1P61619 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SEC61A1P61619 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.51□□□□□ -0.25
SEC61A1P61619 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SEC61A1P61619 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
SEC61A1P61619 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 AC148477.4-201ENST00000613430 1793 ntBASIC13.5□□□□□ -0.25
SEC61A1P61619 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.5□□□□□ -0.25
SEC61A1P61619 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
SEC61A1P61619 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms