Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.86■□□□□ 0.45
RHBDL3P58872 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.86■□□□□ 0.45
RHBDL3P58872 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDL3P58872 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDL3P58872 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDL3P58872 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.86■□□□□ 0.45
RHBDL3P58872 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDL3P58872 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDL3P58872 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDL3P58872 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDL3P58872 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDL3P58872 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RHBDL3P58872 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RHBDL3P58872 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDL3P58872 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RHBDL3P58872 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDL3P58872 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDL3P58872 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.86■□□□□ 0.45
RHBDL3P58872 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDL3P58872 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RHBDL3P58872 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDL3P58872 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDL3P58872 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDL3P58872 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDL3P58872 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDL3P58872 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RHBDL3P58872 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDL3P58872 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDL3P58872 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDL3P58872 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.85■□□□□ 0.45
RHBDL3P58872 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDL3P58872 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.85■□□□□ 0.45
RHBDL3P58872 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RHBDL3P58872 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDL3P58872 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.85■□□□□ 0.45
RHBDL3P58872 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDL3P58872 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.85■□□□□ 0.45
RHBDL3P58872 AC104073.2-201ENST00000453737 312 ntBASIC17.85■□□□□ 0.45
RHBDL3P58872 AC021723.1-201ENST00000486306 515 ntBASIC17.85■□□□□ 0.45
RHBDL3P58872 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.85■□□□□ 0.45
RHBDL3P58872 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDL3P58872 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDL3P58872 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.85■□□□□ 0.45
RHBDL3P58872 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.85■□□□□ 0.45
RHBDL3P58872 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.85■□□□□ 0.45
RHBDL3P58872 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RHBDL3P58872 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.85■□□□□ 0.45
RHBDL3P58872 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RHBDL3P58872 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RHBDL3P58872 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RHBDL3P58872 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RHBDL3P58872 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.84■□□□□ 0.45
RHBDL3P58872 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RHBDL3P58872 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.84■□□□□ 0.45
RHBDL3P58872 AC004899.1-201ENST00000424687 1714 ntBASIC17.84■□□□□ 0.45
RHBDL3P58872 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 AC138932.1-201ENST00000534164 6830 ntBASIC17.84■□□□□ 0.45
RHBDL3P58872 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.84■□□□□ 0.45
RHBDL3P58872 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.84■□□□□ 0.45
RHBDL3P58872 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RHBDL3P58872 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RHBDL3P58872 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
RHBDL3P58872 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 KLF2P1-201ENST00000447438 1042 ntBASIC17.84■□□□□ 0.45
RHBDL3P58872 TUBB8P8-201ENST00000458717 1058 ntBASIC17.84■□□□□ 0.45
RHBDL3P58872 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.84■□□□□ 0.45
RHBDL3P58872 RNA5SP423-201ENST00000517127 109 ntBASIC17.84■□□□□ 0.45
RHBDL3P58872 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.84■□□□□ 0.45
RHBDL3P58872 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.84■□□□□ 0.45
RHBDL3P58872 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.84■□□□□ 0.45
RHBDL3P58872 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.84■□□□□ 0.45
RHBDL3P58872 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.84■□□□□ 0.45
RHBDL3P58872 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.84■□□□□ 0.45
RHBDL3P58872 AC068587.8-201ENST00000641239 219 ntBASIC17.84■□□□□ 0.45
RHBDL3P58872 AC138627.1-207ENST00000641560 1006 ntBASIC17.84■□□□□ 0.45
RHBDL3P58872 AC004923.1-202ENST00000642106 209 ntBASIC17.84■□□□□ 0.45
RHBDL3P58872 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RHBDL3P58872 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.84■□□□□ 0.45
RHBDL3P58872 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RHBDL3P58872 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC17.84■□□□□ 0.45
RHBDL3P58872 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms