Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN8P56748 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN8P56748 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN8P56748 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN8P56748 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN8P56748 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN8P56748 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN8P56748 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CLDN8P56748 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLDN8P56748 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
CLDN8P56748 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN8P56748 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CLDN8P56748 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CLDN8P56748 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CLDN8P56748 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CLDN8P56748 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN8P56748 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN8P56748 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN8P56748 AC092580.3-201ENST00000430932 139 ntBASIC14.57□□□□□ -0.08
CLDN8P56748 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN8P56748 AC114501.2-201ENST00000439631 535 ntBASIC14.57□□□□□ -0.08
CLDN8P56748 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.57□□□□□ -0.08
CLDN8P56748 GAPDHP40-201ENST00000505218 1006 ntBASIC14.57□□□□□ -0.08
CLDN8P56748 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN8P56748 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN8P56748 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN8P56748 AC004449.1-201ENST00000564240 433 ntBASIC14.57□□□□□ -0.08
CLDN8P56748 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.57□□□□□ -0.08
CLDN8P56748 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN8P56748 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN8P56748 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CLDN8P56748 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN8P56748 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN8P56748 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.57□□□□□ -0.08
CLDN8P56748 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN8P56748 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN8P56748 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLDN8P56748 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN8P56748 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN8P56748 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN8P56748 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN8P56748 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.56□□□□□ -0.08
CLDN8P56748 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN8P56748 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLDN8P56748 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN8P56748 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN8P56748 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.56□□□□□ -0.08
CLDN8P56748 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN8P56748 AL158211.3-201ENST00000607385 239 ntBASIC14.56□□□□□ -0.08
CLDN8P56748 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 AL590560.3-201ENST00000623350 461 ntBASIC14.56□□□□□ -0.08
CLDN8P56748 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CLDN8P56748 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN8P56748 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN8P56748 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN8P56748 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms