Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CAV3P56539 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CAV3P56539 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CAV3P56539 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CAV3P56539 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CAV3P56539 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CAV3P56539 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.75□□□□□ -0.21
CAV3P56539 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
CAV3P56539 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.75□□□□□ -0.21
CAV3P56539 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 ELL2P1-201ENST00000413990 1906 ntBASIC13.75□□□□□ -0.21
CAV3P56539 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.75□□□□□ -0.21
CAV3P56539 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.75□□□□□ -0.21
CAV3P56539 AL355306.1-201ENST00000415580 579 ntBASIC13.75□□□□□ -0.21
CAV3P56539 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.75□□□□□ -0.21
CAV3P56539 RN7SL589P-201ENST00000481268 310 ntBASIC13.75□□□□□ -0.21
CAV3P56539 YBX1P5-201ENST00000509441 847 ntBASIC13.75□□□□□ -0.21
CAV3P56539 AC092865.5-201ENST00000545435 363 ntBASIC13.75□□□□□ -0.21
CAV3P56539 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.75□□□□□ -0.21
CAV3P56539 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.75□□□□□ -0.21
CAV3P56539 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CAV3P56539 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
CAV3P56539 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.75□□□□□ -0.21
CAV3P56539 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.75□□□□□ -0.21
CAV3P56539 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.75□□□□□ -0.21
CAV3P56539 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.75□□□□□ -0.21
CAV3P56539 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.75□□□□□ -0.21
CAV3P56539 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CAV3P56539 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CAV3P56539 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CAV3P56539 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CAV3P56539 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 AC113367.3-201ENST00000508316 1912 ntBASIC13.74□□□□□ -0.21
CAV3P56539 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CAV3P56539 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 WASH3P-207ENST00000560956 1394 ntBASIC13.74□□□□□ -0.21
CAV3P56539 FO538757.1-201ENST00000623083 1397 ntBASIC13.74□□□□□ -0.21
CAV3P56539 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.74□□□□□ -0.21
CAV3P56539 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.74□□□□□ -0.21
CAV3P56539 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CAV3P56539 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.74□□□□□ -0.21
CAV3P56539 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.74□□□□□ -0.21
CAV3P56539 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.74□□□□□ -0.21
CAV3P56539 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CAV3P56539 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.74□□□□□ -0.21
CAV3P56539 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
CAV3P56539 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 KRT18P13-201ENST00000400056 1290 ntBASIC13.74□□□□□ -0.21
CAV3P56539 RPSAP43-201ENST00000402237 625 ntBASIC13.74□□□□□ -0.21
CAV3P56539 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CAV3P56539 AL671277.1-201ENST00000429656 993 ntBASIC13.74□□□□□ -0.21
CAV3P56539 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.74□□□□□ -0.21
CAV3P56539 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.74□□□□□ -0.21
CAV3P56539 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.74□□□□□ -0.21
CAV3P56539 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.74□□□□□ -0.21
CAV3P56539 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.74□□□□□ -0.21
CAV3P56539 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.74□□□□□ -0.21
CAV3P56539 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CAV3P56539 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms