Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH4P55283 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH4P55283 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH4P55283 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CDH4P55283 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH4P55283 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 AC126177.1-201ENST00000547829 2218 ntBASIC15.6■□□□□ 0.09
CDH4P55283 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH4P55283 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH4P55283 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH4P55283 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH4P55283 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CDH4P55283 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH4P55283 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CDH4P55283 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
CDH4P55283 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 CNN2P8-201ENST00000421872 913 ntBASIC15.6■□□□□ 0.09
CDH4P55283 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
CDH4P55283 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.6■□□□□ 0.09
CDH4P55283 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 CTBP2P5-201ENST00000454986 1264 ntBASIC15.6■□□□□ 0.09
CDH4P55283 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH4P55283 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.6■□□□□ 0.09
CDH4P55283 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CDH4P55283 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.6■□□□□ 0.09
CDH4P55283 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.6■□□□□ 0.09
CDH4P55283 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.6■□□□□ 0.09
CDH4P55283 AP005482.1-201ENST00000563722 1273 ntBASIC15.6■□□□□ 0.09
CDH4P55283 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH4P55283 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH4P55283 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CDH4P55283 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH4P55283 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH4P55283 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CDH4P55283 MIR6775-201ENST00000617557 69 ntBASIC15.6■□□□□ 0.09
CDH4P55283 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH4P55283 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH4P55283 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH4P55283 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH4P55283 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CDH4P55283 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH4P55283 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.6■□□□□ 0.09
CDH4P55283 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CDH4P55283 LILRP1-201ENST00000444199 1370 ntBASIC15.6■□□□□ 0.09
CDH4P55283 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.6■□□□□ 0.09
CDH4P55283 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CDH4P55283 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDH4P55283 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 AC055811.4-201ENST00000624039 1754 ntBASIC15.59■□□□□ 0.09
CDH4P55283 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CDH4P55283 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CDH4P55283 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH4P55283 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 AL137783.1-201ENST00000623494 1896 ntBASIC15.59■□□□□ 0.09
CDH4P55283 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.59■□□□□ 0.09
CDH4P55283 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CDH4P55283 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH4P55283 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH4P55283 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH4P55283 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH4P55283 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.59■□□□□ 0.09
CDH4P55283 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH4P55283 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH4P55283 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH4P55283 SNX29P1-201ENST00000548357 1007 ntBASIC15.59■□□□□ 0.09
CDH4P55283 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH4P55283 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH4P55283 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH4P55283 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH4P55283 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH4P55283 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms