Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.22□□□□□ -0.61
APOC4P55056 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC11.22□□□□□ -0.61
APOC4P55056 AC022616.1-201ENST00000518688 554 ntBASIC11.22□□□□□ -0.61
APOC4P55056 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.22□□□□□ -0.61
APOC4P55056 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.22□□□□□ -0.61
APOC4P55056 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC11.22□□□□□ -0.61
APOC4P55056 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
APOC4P55056 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.22□□□□□ -0.61
APOC4P55056 RN7SL48P-201ENST00000579283 293 ntBASIC11.22□□□□□ -0.61
APOC4P55056 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.22□□□□□ -0.61
APOC4P55056 AL365203.3-201ENST00000609742 2057 ntBASIC11.22□□□□□ -0.61
APOC4P55056 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 AC145423.3-201ENST00000615987 467 ntBASIC11.22□□□□□ -0.61
APOC4P55056 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.22□□□□□ -0.61
APOC4P55056 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 AC138951.2-201ENST00000623455 1161 ntBASIC11.22□□□□□ -0.61
APOC4P55056 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
APOC4P55056 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
APOC4P55056 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
APOC4P55056 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC4P55056 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC4P55056 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC4P55056 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC4P55056 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC4P55056 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
APOC4P55056 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC4P55056 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC4P55056 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
APOC4P55056 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC4P55056 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC4P55056 MSTO2P-201ENST00000314835 1709 ntBASIC11.21□□□□□ -0.61
APOC4P55056 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC4P55056 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
APOC4P55056 AC022188.1-201ENST00000620960 1664 ntBASIC11.21□□□□□ -0.61
APOC4P55056 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
APOC4P55056 AL158070.2-201ENST00000623713 1621 ntBASIC11.21□□□□□ -0.61
APOC4P55056 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
APOC4P55056 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC4P55056 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC4P55056 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC4P55056 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.21□□□□□ -0.61
APOC4P55056 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC4P55056 KRT8P14-201ENST00000414254 1442 ntBASIC11.21□□□□□ -0.61
APOC4P55056 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC4P55056 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC11.21□□□□□ -0.61
APOC4P55056 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC4P55056 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC11.21□□□□□ -0.61
APOC4P55056 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
APOC4P55056 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
APOC4P55056 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
APOC4P55056 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
APOC4P55056 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.21□□□□□ -0.61
APOC4P55056 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC4P55056 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
APOC4P55056 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.21□□□□□ -0.61
APOC4P55056 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC11.21□□□□□ -0.61
APOC4P55056 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.21□□□□□ -0.61
APOC4P55056 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC11.21□□□□□ -0.61
APOC4P55056 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
APOC4P55056 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC11.21□□□□□ -0.61
APOC4P55056 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.21□□□□□ -0.61
APOC4P55056 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC11.21□□□□□ -0.61
APOC4P55056 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
APOC4P55056 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11.21□□□□□ -0.61
APOC4P55056 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.21□□□□□ -0.61
APOC4P55056 PRSS30P-206ENST00000641773 873 ntBASIC11.21□□□□□ -0.61
APOC4P55056 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.21□□□□□ -0.62
APOC4P55056 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
APOC4P55056 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
APOC4P55056 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.21□□□□□ -0.62
APOC4P55056 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms