Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ATP1B3P54709 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ATP1B3P54709 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.37□□□□□ -0.27
ATP1B3P54709 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.37□□□□□ -0.27
ATP1B3P54709 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.37□□□□□ -0.27
ATP1B3P54709 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.37□□□□□ -0.27
ATP1B3P54709 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.37□□□□□ -0.27
ATP1B3P54709 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
ATP1B3P54709 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
ATP1B3P54709 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
ATP1B3P54709 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ATP1B3P54709 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ATP1B3P54709 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.37□□□□□ -0.27
ATP1B3P54709 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
ATP1B3P54709 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.37□□□□□ -0.27
ATP1B3P54709 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ATP1B3P54709 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.37□□□□□ -0.27
ATP1B3P54709 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.37□□□□□ -0.27
ATP1B3P54709 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
ATP1B3P54709 AL137784.3-201ENST00000623858 2288 ntBASIC13.37□□□□□ -0.27
ATP1B3P54709 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ATP1B3P54709 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.36□□□□□ -0.27
ATP1B3P54709 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.36□□□□□ -0.27
ATP1B3P54709 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.36□□□□□ -0.27
ATP1B3P54709 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
ATP1B3P54709 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ATP1B3P54709 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.36□□□□□ -0.27
ATP1B3P54709 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.36□□□□□ -0.27
ATP1B3P54709 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ATP1B3P54709 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.36□□□□□ -0.27
ATP1B3P54709 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ATP1B3P54709 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.36□□□□□ -0.27
ATP1B3P54709 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ATP1B3P54709 AP000347.1-202ENST00000435868 847 ntBASIC13.36□□□□□ -0.27
ATP1B3P54709 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 SLED1-202ENST00000512051 380 ntBASIC13.36□□□□□ -0.27
ATP1B3P54709 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.36□□□□□ -0.27
ATP1B3P54709 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.36□□□□□ -0.27
ATP1B3P54709 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.36□□□□□ -0.27
ATP1B3P54709 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.36□□□□□ -0.27
ATP1B3P54709 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.36□□□□□ -0.27
ATP1B3P54709 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.36□□□□□ -0.27
ATP1B3P54709 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.36□□□□□ -0.27
ATP1B3P54709 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ATP1B3P54709 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ATP1B3P54709 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.36□□□□□ -0.27
ATP1B3P54709 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.36□□□□□ -0.27
ATP1B3P54709 AJ011931.1-201ENST00000618749 2492 ntBASIC13.36□□□□□ -0.27
ATP1B3P54709 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 MROH4P-201ENST00000431302 1578 ntBASIC13.36□□□□□ -0.27
ATP1B3P54709 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ATP1B3P54709 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.36□□□□□ -0.27
ATP1B3P54709 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATP1B3P54709 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.36□□□□□ -0.27
ATP1B3P54709 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.35□□□□□ -0.27
ATP1B3P54709 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 ST20-AS1-201ENST00000560255 4223 ntBASIC13.35□□□□□ -0.27
ATP1B3P54709 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ATP1B3P54709 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.35□□□□□ -0.27
ATP1B3P54709 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.35□□□□□ -0.27
ATP1B3P54709 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.35□□□□□ -0.27
ATP1B3P54709 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ATP1B3P54709 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms