Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNA3P52797 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNA3P52797 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNA3P52797 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNA3P52797 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
EFNA3P52797 CICP6-201ENST00000457191 2729 ntBASIC14.31□□□□□ -0.12
EFNA3P52797 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.31□□□□□ -0.12
EFNA3P52797 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.31□□□□□ -0.12
EFNA3P52797 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNA3P52797 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EFNA3P52797 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.31□□□□□ -0.12
EFNA3P52797 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
EFNA3P52797 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.31□□□□□ -0.12
EFNA3P52797 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
EFNA3P52797 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EFNA3P52797 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
EFNA3P52797 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
EFNA3P52797 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 TMBIM7P-203ENST00000641617 1718 ntBASIC14.3□□□□□ -0.12
EFNA3P52797 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
EFNA3P52797 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.3□□□□□ -0.12
EFNA3P52797 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.3□□□□□ -0.12
EFNA3P52797 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
EFNA3P52797 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
EFNA3P52797 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.3□□□□□ -0.12
EFNA3P52797 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 KRT18P25-201ENST00000508931 1278 ntBASIC14.3□□□□□ -0.12
EFNA3P52797 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.3□□□□□ -0.12
EFNA3P52797 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.3□□□□□ -0.12
EFNA3P52797 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.3□□□□□ -0.12
EFNA3P52797 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.3□□□□□ -0.12
EFNA3P52797 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.3□□□□□ -0.12
EFNA3P52797 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 AC073347.1-201ENST00000421633 2643 ntBASIC14.3□□□□□ -0.12
EFNA3P52797 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 AP000845.1-201ENST00000581677 2131 ntBASIC14.3□□□□□ -0.12
EFNA3P52797 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
EFNA3P52797 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
EFNA3P52797 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.3□□□□□ -0.12
EFNA3P52797 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
EFNA3P52797 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
EFNA3P52797 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNA3P52797 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNA3P52797 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EFNA3P52797 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.29□□□□□ -0.12
EFNA3P52797 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.29□□□□□ -0.12
EFNA3P52797 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
EFNA3P52797 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNA3P52797 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNA3P52797 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.29□□□□□ -0.12
EFNA3P52797 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNA3P52797 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
EFNA3P52797 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNA3P52797 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNA3P52797 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
EFNA3P52797 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNA3P52797 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
EFNA3P52797 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNA3P52797 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EFNA3P52797 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNA3P52797 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
EFNA3P52797 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
EFNA3P52797 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNA3P52797 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EFNA3P52797 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
EFNA3P52797 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.29□□□□□ -0.12
EFNA3P52797 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
EFNA3P52797 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms