Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCR9P51686 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCR9P51686 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.55□□□□□ -0.24
CCR9P51686 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.55□□□□□ -0.24
CCR9P51686 ELL2P1-201ENST00000413990 1906 ntBASIC13.54□□□□□ -0.24
CCR9P51686 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CCR9P51686 AC126335.2-201ENST00000623362 4637 ntBASIC13.54□□□□□ -0.24
CCR9P51686 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.54□□□□□ -0.24
CCR9P51686 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CCR9P51686 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
CCR9P51686 Z97205.2-201ENST00000564697 1639 ntBASIC13.54□□□□□ -0.24
CCR9P51686 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCR9P51686 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CCR9P51686 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
CCR9P51686 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCR9P51686 KRT18P32-201ENST00000424695 1287 ntBASIC13.54□□□□□ -0.24
CCR9P51686 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.54□□□□□ -0.24
CCR9P51686 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.54□□□□□ -0.24
CCR9P51686 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.54□□□□□ -0.24
CCR9P51686 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CCR9P51686 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.54□□□□□ -0.24
CCR9P51686 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.54□□□□□ -0.24
CCR9P51686 AC003101.2-201ENST00000612557 442 ntBASIC13.54□□□□□ -0.24
CCR9P51686 MIR6069-201ENST00000620069 79 ntBASIC13.54□□□□□ -0.24
CCR9P51686 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.54□□□□□ -0.24
CCR9P51686 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.54□□□□□ -0.24
CCR9P51686 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CCR9P51686 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
CCR9P51686 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
CCR9P51686 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCR9P51686 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CCR9P51686 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.54□□□□□ -0.24
CCR9P51686 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.54□□□□□ -0.24
CCR9P51686 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.54□□□□□ -0.24
CCR9P51686 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.54□□□□□ -0.24
CCR9P51686 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.54□□□□□ -0.24
CCR9P51686 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCR9P51686 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.54□□□□□ -0.24
CCR9P51686 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.54□□□□□ -0.24
CCR9P51686 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.53□□□□□ -0.24
CCR9P51686 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.53□□□□□ -0.24
CCR9P51686 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.53□□□□□ -0.24
CCR9P51686 INTS4P1-203ENST00000641008 3683 ntBASIC13.53□□□□□ -0.24
CCR9P51686 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.53□□□□□ -0.24
CCR9P51686 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CCR9P51686 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.53□□□□□ -0.24
CCR9P51686 AC074338.1-201ENST00000416825 156 ntBASIC13.53□□□□□ -0.24
CCR9P51686 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.53□□□□□ -0.24
CCR9P51686 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.53□□□□□ -0.24
CCR9P51686 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.53□□□□□ -0.24
CCR9P51686 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.53□□□□□ -0.24
CCR9P51686 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CCR9P51686 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.53□□□□□ -0.24
CCR9P51686 PGAM5P1-201ENST00000518923 814 ntBASIC13.53□□□□□ -0.24
CCR9P51686 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.53□□□□□ -0.24
CCR9P51686 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.53□□□□□ -0.24
CCR9P51686 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.53□□□□□ -0.24
CCR9P51686 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.53□□□□□ -0.24
CCR9P51686 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.53□□□□□ -0.24
CCR9P51686 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.53□□□□□ -0.24
CCR9P51686 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.53□□□□□ -0.24
CCR9P51686 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.53□□□□□ -0.24
CCR9P51686 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.53□□□□□ -0.24
CCR9P51686 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 AL928921.2-201ENST00000641325 2442 ntBASIC13.53□□□□□ -0.24
CCR9P51686 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.53□□□□□ -0.24
CCR9P51686 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCR9P51686 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms