Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
CX3CR1P49238 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CX3CR1P49238 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.24
CX3CR1P49238 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
CX3CR1P49238 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CX3CR1P49238 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CX3CR1P49238 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CX3CR1P49238 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CX3CR1P49238 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CX3CR1P49238 AC007191.1-201ENST00000623179 2995 ntBASIC13.52□□□□□ -0.24
CX3CR1P49238 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CX3CR1P49238 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CX3CR1P49238 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.52□□□□□ -0.25
CX3CR1P49238 TREML5P-201ENST00000421694 576 ntBASIC13.52□□□□□ -0.25
CX3CR1P49238 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.52□□□□□ -0.25
CX3CR1P49238 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.52□□□□□ -0.25
CX3CR1P49238 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.52□□□□□ -0.25
CX3CR1P49238 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.52□□□□□ -0.25
CX3CR1P49238 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.52□□□□□ -0.25
CX3CR1P49238 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.52□□□□□ -0.25
CX3CR1P49238 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.52□□□□□ -0.25
CX3CR1P49238 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.52□□□□□ -0.25
CX3CR1P49238 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.52□□□□□ -0.25
CX3CR1P49238 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.52□□□□□ -0.25
CX3CR1P49238 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.52□□□□□ -0.25
CX3CR1P49238 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.52□□□□□ -0.25
CX3CR1P49238 AC011467.4-201ENST00000594891 528 ntBASIC13.52□□□□□ -0.25
CX3CR1P49238 AC023511.2-201ENST00000618803 211 ntBASIC13.52□□□□□ -0.25
CX3CR1P49238 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.52□□□□□ -0.25
CX3CR1P49238 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CX3CR1P49238 AC087499.5-201ENST00000452760 1342 ntBASIC13.52□□□□□ -0.25
CX3CR1P49238 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.52□□□□□ -0.25
CX3CR1P49238 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.52□□□□□ -0.25
CX3CR1P49238 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.52□□□□□ -0.25
CX3CR1P49238 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 FGD5P1-202ENST00000614866 2498 ntBASIC13.52□□□□□ -0.25
CX3CR1P49238 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.52□□□□□ -0.25
CX3CR1P49238 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.52□□□□□ -0.25
CX3CR1P49238 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.52□□□□□ -0.25
CX3CR1P49238 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.52□□□□□ -0.25
CX3CR1P49238 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CX3CR1P49238 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CX3CR1P49238 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.51□□□□□ -0.25
CX3CR1P49238 AC232323.1-201ENST00000540724 2099 ntBASIC13.51□□□□□ -0.25
CX3CR1P49238 REXO1L5P-201ENST00000622260 2098 ntBASIC13.51□□□□□ -0.25
CX3CR1P49238 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.51□□□□□ -0.25
CX3CR1P49238 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CX3CR1P49238 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CX3CR1P49238 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.51□□□□□ -0.25
CX3CR1P49238 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.51□□□□□ -0.25
CX3CR1P49238 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.51□□□□□ -0.25
CX3CR1P49238 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CX3CR1P49238 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CX3CR1P49238 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.51□□□□□ -0.25
CX3CR1P49238 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.51□□□□□ -0.25
CX3CR1P49238 TOMM22P5-201ENST00000416399 439 ntBASIC13.51□□□□□ -0.25
CX3CR1P49238 AC092580.3-201ENST00000430932 139 ntBASIC13.51□□□□□ -0.25
CX3CR1P49238 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.51□□□□□ -0.25
CX3CR1P49238 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.51□□□□□ -0.25
CX3CR1P49238 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.51□□□□□ -0.25
CX3CR1P49238 IGHV3-42-201ENST00000520410 361 ntBASIC13.51□□□□□ -0.25
CX3CR1P49238 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CX3CR1P49238 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.51□□□□□ -0.25
CX3CR1P49238 AC044860.1-202ENST00000559481 777 ntBASIC13.51□□□□□ -0.25
CX3CR1P49238 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.51□□□□□ -0.25
CX3CR1P49238 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.51□□□□□ -0.25
CX3CR1P49238 AP001160.2-201ENST00000596071 487 ntBASIC13.51□□□□□ -0.25
CX3CR1P49238 AL158211.3-201ENST00000607385 239 ntBASIC13.51□□□□□ -0.25
CX3CR1P49238 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms