Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC092127.1-201ENST00000567093 3455 ntBASIC14.49□□□□□ -0.09
SOX3P41225 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX3P41225 LINC00528-201ENST00000600723 2160 ntBASIC14.49□□□□□ -0.09
SOX3P41225 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX3P41225 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SOX3P41225 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.48□□□□□ -0.09
SOX3P41225 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.48□□□□□ -0.09
SOX3P41225 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
SOX3P41225 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SOX3P41225 AC007191.1-201ENST00000623179 2995 ntBASIC14.48□□□□□ -0.09
SOX3P41225 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SOX3P41225 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.48□□□□□ -0.09
SOX3P41225 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.48□□□□□ -0.09
SOX3P41225 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SOX3P41225 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.48□□□□□ -0.09
SOX3P41225 AC112693.3-201ENST00000624819 1983 ntBASIC14.48□□□□□ -0.09
SOX3P41225 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.48□□□□□ -0.09
SOX3P41225 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
SOX3P41225 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
SOX3P41225 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.48□□□□□ -0.09
SOX3P41225 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 AC104596.2-201ENST00000512793 793 ntBASIC14.48□□□□□ -0.09
SOX3P41225 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.48□□□□□ -0.09
SOX3P41225 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.48□□□□□ -0.09
SOX3P41225 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SOX3P41225 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.48□□□□□ -0.09
SOX3P41225 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.48□□□□□ -0.09
SOX3P41225 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.48□□□□□ -0.09
SOX3P41225 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.48□□□□□ -0.09
SOX3P41225 MIR8072-201ENST00000614241 80 ntBASIC14.48□□□□□ -0.09
SOX3P41225 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SOX3P41225 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
SOX3P41225 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SOX3P41225 AC138969.3-201ENST00000546612 1459 ntBASIC14.48□□□□□ -0.09
SOX3P41225 AC138932.2-201ENST00000548268 1459 ntBASIC14.48□□□□□ -0.09
SOX3P41225 AC126755.4-201ENST00000549796 1459 ntBASIC14.48□□□□□ -0.09
SOX3P41225 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SOX3P41225 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.48□□□□□ -0.09
SOX3P41225 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 C18orf15-201ENST00000623680 2534 ntBASIC14.48□□□□□ -0.09
SOX3P41225 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX3P41225 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.47□□□□□ -0.09
SOX3P41225 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
SOX3P41225 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SOX3P41225 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SOX3P41225 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.47□□□□□ -0.09
SOX3P41225 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SOX3P41225 MIR600HG-201ENST00000449175 5984 ntBASIC14.47□□□□□ -0.09
SOX3P41225 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.47□□□□□ -0.09
SOX3P41225 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.47□□□□□ -0.09
SOX3P41225 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.47□□□□□ -0.09
SOX3P41225 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SOX3P41225 AP006294.1-201ENST00000415407 339 ntBASIC14.47□□□□□ -0.09
SOX3P41225 COX5BP8-201ENST00000416911 349 ntBASIC14.47□□□□□ -0.09
SOX3P41225 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.47□□□□□ -0.09
SOX3P41225 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.47□□□□□ -0.09
SOX3P41225 RN7SL399P-201ENST00000471648 279 ntBASIC14.47□□□□□ -0.09
SOX3P41225 ELK1P1-201ENST00000485699 580 ntBASIC14.47□□□□□ -0.09
SOX3P41225 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.47□□□□□ -0.09
SOX3P41225 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.47□□□□□ -0.09
SOX3P41225 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.47□□□□□ -0.09
SOX3P41225 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.47□□□□□ -0.09
SOX3P41225 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
SOX3P41225 CTBP2P3-201ENST00000585629 1255 ntBASIC14.47□□□□□ -0.09
SOX3P41225 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.47□□□□□ -0.09
SOX3P41225 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.47□□□□□ -0.09
SOX3P41225 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.47□□□□□ -0.09
SOX3P41225 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX3P41225 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.47□□□□□ -0.09
SOX3P41225 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SOX3P41225 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms